package bio_io

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val iter : t -> query: (([< `Read | `Set_and_create ], t, Base.string) Fieldslib.Field.t_with_perm -> t -> Base.string -> 'a) -> target: (([< `Read | `Set_and_create ], t, Base.string) Fieldslib.Field.t_with_perm -> t -> Base.string -> 'b) -> fident: (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm -> t -> Base.float -> 'c) -> alnlen: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> 'd) -> mismatch: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> 'e) -> gapopen: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> 'f) -> qstart: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> 'g) -> qend: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> 'h) -> tstart: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> 'i) -> tend: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> 'j) -> evalue: (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm -> t -> Base.float -> 'k) -> bits: (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm -> t -> Base.float -> 'l) -> 'm
val fold : t -> init:'a -> query: ('b -> ([< `Read | `Set_and_create ], t, Base.string) Fieldslib.Field.t_with_perm -> t -> Base.string -> 'c) -> target: ('d -> ([< `Read | `Set_and_create ], t, Base.string) Fieldslib.Field.t_with_perm -> t -> Base.string -> 'e) -> fident: ('f -> ([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm -> t -> Base.float -> 'g) -> alnlen: ('h -> ([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> 'i) -> mismatch: ('j -> ([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> 'k) -> gapopen: ('l -> ([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> 'm) -> qstart: ('n -> ([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> 'o) -> qend: ('p -> ([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> 'q) -> tstart: ('r -> ([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> 's) -> tend: ('t -> ([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> 'u) -> evalue: ('v -> ([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm -> t -> Base.float -> 'w) -> bits: ('x -> ([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm -> t -> Base.float -> 'y) -> 'z
val for_all : t -> query: (([< `Read | `Set_and_create ], t, Base.string) Fieldslib.Field.t_with_perm -> t -> Base.string -> Base.bool) -> target: (([< `Read | `Set_and_create ], t, Base.string) Fieldslib.Field.t_with_perm -> t -> Base.string -> Base.bool) -> fident: (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm -> t -> Base.float -> Base.bool) -> alnlen: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> Base.bool) -> mismatch: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> Base.bool) -> gapopen: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> Base.bool) -> qstart: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> Base.bool) -> qend: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> Base.bool) -> tstart: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> Base.bool) -> tend: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> Base.bool) -> evalue: (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm -> t -> Base.float -> Base.bool) -> bits: (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm -> t -> Base.float -> Base.bool) -> Base.bool
val exists : t -> query: (([< `Read | `Set_and_create ], t, Base.string) Fieldslib.Field.t_with_perm -> t -> Base.string -> Base.bool) -> target: (([< `Read | `Set_and_create ], t, Base.string) Fieldslib.Field.t_with_perm -> t -> Base.string -> Base.bool) -> fident: (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm -> t -> Base.float -> Base.bool) -> alnlen: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> Base.bool) -> mismatch: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> Base.bool) -> gapopen: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> Base.bool) -> qstart: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> Base.bool) -> qend: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> Base.bool) -> tstart: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> Base.bool) -> tend: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> Base.bool) -> evalue: (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm -> t -> Base.float -> Base.bool) -> bits: (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm -> t -> Base.float -> Base.bool) -> Base.bool
val to_list : t -> query: (([< `Read | `Set_and_create ], t, Base.string) Fieldslib.Field.t_with_perm -> t -> Base.string -> 'a) -> target: (([< `Read | `Set_and_create ], t, Base.string) Fieldslib.Field.t_with_perm -> t -> Base.string -> 'b) -> fident: (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm -> t -> Base.float -> 'c) -> alnlen: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> 'd) -> mismatch: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> 'e) -> gapopen: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> 'f) -> qstart: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> 'g) -> qend: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> 'h) -> tstart: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> 'i) -> tend: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> 'j) -> evalue: (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm -> t -> Base.float -> 'k) -> bits: (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm -> t -> Base.float -> 'l) -> 'm list
val map : t -> query: (([< `Read | `Set_and_create ], t, Base.string) Fieldslib.Field.t_with_perm -> t -> Base.string -> Base.string) -> target: (([< `Read | `Set_and_create ], t, Base.string) Fieldslib.Field.t_with_perm -> t -> Base.string -> Base.string) -> fident: (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm -> t -> Base.float -> Base.float) -> alnlen: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> Base.int) -> mismatch: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> Base.int) -> gapopen: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> Base.int) -> qstart: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> Base.int) -> qend: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> Base.int) -> tstart: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> Base.int) -> tend: (([< `Read | `Set_and_create ], t, Base.int) Fieldslib.Field.t_with_perm -> t -> Base.int -> Base.int) -> evalue: (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm -> t -> Base.float -> Base.float) -> bits: (([< `Read | `Set_and_create ], t, Base.float) Fieldslib.Field.t_with_perm -> t -> Base.float -> Base.float) -> t
val set_all_mutable_fields : 'a -> unit