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package orrandomForest
orrandomForest 3.0.0
Error log
The package failed to build. The error log from opam follows.
Opam plugin "depext" may require upgrading/reinstalling. Reinstall the plugin on the current switch? [Y/n] y
The following actions will be performed:
- recompile opam-depext 1.2.1-1
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> retrieved opam-depext.1.2.1-1 (cached)
-> removed opam-depext.1.2.1-1
-> installed opam-depext.1.2.1-1
Done.
<><> opam-depext.1.2.1-1 installed successfully <><><><><><><><><><><><><><><><>
=> opam-depext is unnecessary when used with opam >= 2.1. Please use opam install directly instead
# Run eval $(opam env) to update the current shell environment
<><> Carrying on to "opam depext -viy orrandomForest.3.0.0 parany.14.0.1 ocamlfind.1.9.6 num.1.5 minicli.5.0.2 line_oriented.1.3.0 dune.3.13.0 dolog.6.0.0 cpu.2.0.0 cpm.12.2.0 conf-which.1 conf-r.1.0.0 conf-autoconf.0.1 camlp-streams.5.0.1 batteries.3.7.2"
You are using opam 2.1+, where external dependency handling has been integrated: consider calling opam directly, the 'depext' plugin interface is provided for backwards compatibility only
# Detecting depexts using vars: arch=x86_64, os=linux, os-distribution=debian, os-family=debian
# The following system packages are needed:
autoconf
debianutils
r-base-core
[NOTE] Package dune is already installed (current version is 3.13.0).
[NOTE] Package ocamlfind is already installed (current version is 1.9.6).
The following actions will be performed:
- install conf-r 1.0.0
- install minicli 5.0.2
- install conf-which 1
- install num 1.5
- install camlp-streams 5.0.1
- install dolog 6.0.0
- install conf-autoconf 0.1
- install batteries 3.7.2
- install cpu 2.0.0
- install line_oriented 1.3.0
- install cpm 12.2.0
- install parany 14.0.1
- install orrandomForest 3.0.0
===== 13 to install =====
The following system packages will first need to be installed:
autoconf r-base-core
<><> Handling external dependencies <><><><><><><><><><><><><><><><><><><><><><>
Let opam run your package manager to install the required system packages?
(answer 'n' for other options) [Y/n] y
+ /usr/bin/sudo "apt-get" "install" "-qq" "-yy" "autoconf" "r-base-core"
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- Setting up libblas3:amd64 (3.11.0-2) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
- Setting up libglib2.0-data (2.74.6-2) ...
- Setting up libpkgconf3:amd64 (1.8.1-1) ...
- Setting up libgles2:amd64 (1.6.0-1) ...
- Setting up libdata-dump-perl (1.25-1) ...
- Setting up libjpeg62-turbo-dev:amd64 (1:2.1.5-2) ...
- Setting up libxfixes3:amd64 (1:6.0.0-2) ...
- Setting up libxcb-sync1:amd64 (1.15-1) ...
- Setting up libipc-system-simple-perl (1.30-2) ...
- Setting up libxml-xpathengine-perl (0.14-2) ...
- Setting up libncurses6:amd64 (6.4-4) ...
- Setting up libdbus-1-3:amd64 (1.14.10-1~deb12u1) ...
- Setting up libfribidi0:amd64 (1.0.8-2.1) ...
- Setting up libxinerama1:amd64 (2:1.1.4-3) ...
- Setting up libxv1:amd64 (2:1.0.11-1.1) ...
- Setting up libpcre32-3:amd64 (2:8.39-15) ...
- Setting up libio-html-perl (1.004-3) ...
- Setting up libxrandr2:amd64 (2:1.5.2-2+b1) ...
- Setting up libtcl8.6:amd64 (8.6.13+dfsg-2) ...
- Setting up icu-devtools (72.1-3) ...
- Setting up pkgconf-bin (1.8.1-1) ...
- Setting up libsensors5:amd64 (1:3.6.0-7.1) ...
- Setting up libglapi-mesa:amd64 (22.3.6-1+deb12u1) ...
- Setting up libgfortran5:amd64 (12.2.0-14) ...
- Setting up autoconf (2.71-3) ...
- Setting up libtimedate-perl (2.3300-2) ...
- Setting up libregexp-ipv6-perl (0.03-3) ...
- Setting up liblzma-dev:amd64 (5.4.1-0.2) ...
- Setting up libxcb-dri2-0:amd64 (1.15-1) ...
- Setting up zlib1g-dev:amd64 (1:1.2.13.dfsg-1) ...
- Setting up libpcre2-posix3:amd64 (10.42-1) ...
- Setting up sensible-utils (0.0.17+nmu1) ...
- Setting up libxshmfence1:amd64 (1.3-1) ...
- Setting up libxcb-randr0:amd64 (1.15-1) ...
- Setting up dbus-session-bus-common (1.14.10-1~deb12u1) ...
- Setting up libharfbuzz0b:amd64 (6.0.0+dfsg-3) ...
- Setting up libthai-data (0.1.29-1) ...
- Setting up libxss1:amd64 (1:1.2.3-1) ...
- Setting up libxkbfile1:amd64 (1:1.1.0-1) ...
- Setting up dbus-system-bus-common (1.14.10-1~deb12u1) ...
- Setting up libdrm-common (2.4.114-1) ...
- Setting up libelf1:amd64 (0.188-2.1) ...
- Setting up libxcomposite1:amd64 (1:0.4.5-1) ...
- Setting up libicu-dev:amd64 (72.1-3) ...
- Setting up libxml2:amd64 (2.9.14+dfsg-1.3~deb12u1) ...
- Setting up xdg-utils (1.1.3-4.1) ...
- update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
- Setting up liburi-perl (5.17-1) ...
- Setting up dbus-bin (1.14.10-1~deb12u1) ...
- Setting up libx11-protocol-perl (0.56-9) ...
- Setting up libblas-dev:amd64 (3.11.0-2) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode
- Setting up libbz2-dev:amd64 (1.0.8-5+b1) ...
- Setting up libwayland-client0:amd64 (1.21.0-1) ...
- Setting up libnet-ssleay-perl:amd64 (1.92-2+b1) ...
- Setting up automake (1:1.16.5-1.3) ...
- update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
- Setting up libpcrecpp0v5:amd64 (2:8.39-15) ...
- Setting up libice6:amd64 (2:1.0.10-1) ...
- Setting up libhttp-date-perl (6.05-2) ...
- Setting up liblapack3:amd64 (3.11.0-2) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
- Setting up libxft2:amd64 (2.3.6-1) ...
- Setting up libncurses-dev:amd64 (6.4-4) ...
- Setting up libfile-basedir-perl (0.09-2) ...
- Setting up libfile-listing-perl (6.15-1) ...
- Setting up libpcre2-dev:amd64 (10.42-1) ...
- Setting up libpcre3-dev:amd64 (2:8.39-15) ...
- Setting up libxtst6:amd64 (2:1.2.3-1.1) ...
- Setting up libtk8.6:amd64 (8.6.13-2) ...
- Setting up libxcursor1:amd64 (1:1.2.1-1) ...
- Setting up libpng-dev:amd64 (1.6.39-2) ...
- Setting up libjpeg-dev:amd64 (1:2.1.5-2) ...
- Setting up libnet-http-perl (6.22-1) ...
- Setting up libgfortran-12-dev:amd64 (12.2.0-14) ...
- Setting up dbus-daemon (1.14.10-1~deb12u1) ...
- Setting up libreadline-dev:amd64 (8.2-1.3) ...
- Setting up pkgconf:amd64 (1.8.1-1) ...
- Setting up libthai0:amd64 (0.1.29-1) ...
- Setting up gfortran-12 (12.2.0-14) ...
- Setting up dbus (1.14.10-1~deb12u1) ...
- invoke-rc.d: could not determine current runlevel
- invoke-rc.d: policy-rc.d denied execution of start.
- Setting up shared-mime-info (2.2-1) ...
- Setting up liblapack-dev:amd64 (3.11.0-2) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode
- Setting up pkg-config:amd64 (1.8.1-1) ...
- Setting up ucf (3.0043+nmu1) ...
- Setting up libfile-desktopentry-perl (0.22-3) ...
- Setting up libwww-robotrules-perl (6.02-1) ...
- Setting up libdrm2:amd64 (2.4.114-1+b1) ...
- Setting up libhtml-parser-perl:amd64 (3.81-1) ...
- Setting up libllvm15:amd64 (1:15.0.6-4+b1) ...
- Setting up libncurses5-dev:amd64 (6.4-4) ...
- Setting up libsm6:amd64 (2:1.2.3-1) ...
- Setting up libio-socket-ssl-perl (2.081-2) ...
- Setting up libhttp-message-perl (6.44-1) ...
- Setting up libdrm-amdgpu1:amd64 (2.4.114-1+b1) ...
- Setting up libhtml-form-perl (6.11-1) ...
- Setting up libfile-mimeinfo-perl (0.33-1) ...
- Setting up libpaper1:amd64 (1.1.29) ...
-
- Creating config file /etc/papersize with new version
- Setting up libhttp-negotiate-perl (6.01-2) ...
- Setting up libdrm-nouveau2:amd64 (2.4.114-1+b1) ...
- Setting up libgbm1:amd64 (22.3.6-1+deb12u1) ...
- Setting up libhttp-cookies-perl (6.10-1) ...
- Setting up libdrm-radeon1:amd64 (2.4.114-1+b1) ...
- Setting up libhtml-tree-perl (5.07-3) ...
- Setting up libpango-1.0-0:amd64 (1.50.12+ds-1) ...
- Setting up libdrm-intel1:amd64 (2.4.114-1+b1) ...
- Setting up libgl1-mesa-dri:amd64 (22.3.6-1+deb12u1) ...
- Setting up libhtml-format-perl (2.16-2) ...
- Setting up libpaper-utils (1.1.29) ...
- Setting up gfortran (4:12.2.0-3) ...
- update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
- update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
- Setting up libegl-mesa0:amd64 (22.3.6-1+deb12u1) ...
- Setting up libnet-smtp-ssl-perl (1.04-2) ...
- Setting up libmailtools-perl (2.21-2) ...
- Setting up libxt6:amd64 (1:1.2.1-1.1) ...
- Setting up libhttp-daemon-perl (6.16-1) ...
- Setting up libegl1:amd64 (1.6.0-1) ...
- Setting up libpangoft2-1.0-0:amd64 (1.50.12+ds-1) ...
- Setting up libpangocairo-1.0-0:amd64 (1.50.12+ds-1) ...
- Setting up libxmu6:amd64 (2:1.1.3-3) ...
- Setting up libglx-mesa0:amd64 (22.3.6-1+deb12u1) ...
- Setting up libglx0:amd64 (1.6.0-1) ...
- Setting up libxaw7:amd64 (2:1.0.14-1) ...
- Setting up x11-xserver-utils (7.7+9+b1) ...
- Setting up libgl1:amd64 (1.6.0-1) ...
- Setting up r-base-core (4.2.2.20221110-2) ...
-
- Creating config file /etc/R/Renviron with new version
- Setting up r-cran-lattice (0.20-45-3) ...
- Setting up r-cran-nlme (3.1.162-1) ...
- Setting up zutty (0.14.0.20230218+dfsg1-1) ...
- update-alternatives: using /usr/bin/zutty to provide /usr/bin/x-terminal-emulator (x-terminal-emulator) in auto mode
- Setting up r-cran-cluster (2.1.4-1) ...
- Setting up x11-utils (7.7+5) ...
- Setting up r-cran-nnet (7.3-18-1) ...
- Setting up r-cran-codetools (0.2-19-1) ...
- Setting up r-cran-boot (1.3-28.1-1) ...
- Setting up r-base-dev (4.2.2.20221110-2) ...
- Setting up r-cran-spatial (7.3-16-1) ...
- Setting up r-cran-mass (7.3-58.2-1) ...
- Setting up r-cran-foreign (0.8.84-1) ...
- Setting up r-cran-matrix (1.5-3-1) ...
- Setting up r-cran-kernsmooth (2.23-20-1) ...
- Setting up r-cran-mgcv (1.8-41-1) ...
- Setting up r-cran-class (7.3-21-1) ...
- Setting up r-cran-survival (3.5-3-1) ...
- Setting up r-cran-rpart (4.1.19-1) ...
- Setting up r-recommended (4.2.2.20221110-2) ...
- Setting up liblwp-protocol-https-perl (6.10-1) ...
- Setting up libwww-perl (6.68-1) ...
- Setting up libxml-parser-perl (2.46-4) ...
- Setting up libxml-twig-perl (1:3.52-2) ...
- Setting up libnet-dbus-perl (1.2.0-2) ...
- Processing triggers for libc-bin (2.36-9+deb12u3) ...
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
Processing 1/39:
Processing 2/39:
Processing 3/39:
Processing 4/39:
Processing 5/39:
Processing 6/39:
Processing 7/39: [conf-r: R CMD]
Processing 8/39: [conf-r: R CMD] [conf-which: which which]
-> retrieved batteries.3.7.2 (cached)
Processing 9/39: [conf-r: R CMD] [conf-which: which which]
-> retrieved camlp-streams.5.0.1 (cached)
Processing 10/39: [conf-r: R CMD] [conf-which: which which]
Processing 11/39: [camlp-streams: dune build] [conf-r: R CMD] [conf-which: which which]
-> retrieved cpm.12.2.0 (cached)
Processing 12/39: [camlp-streams: dune build] [conf-r: R CMD] [conf-which: which which]
- /usr/bin/which
-> compiled conf-which.1
Processing 12/39: [camlp-streams: dune build] [conf-r: R CMD]
-> installed conf-which.1
Processing 13/39: [camlp-streams: dune build] [conf-r: R CMD]
Processing 14/39: [camlp-streams: dune build] [conf-autoconf: which autoconf] [conf-r: R CMD]
-> retrieved cpu.2.0.0 (cached)
Processing 15/39: [camlp-streams: dune build] [conf-autoconf: which autoconf] [conf-r: R CMD]
-> retrieved dolog.6.0.0 (cached)
Processing 16/39: [camlp-streams: dune build] [conf-autoconf: which autoconf] [conf-r: R CMD]
Processing 17/39: [camlp-streams: dune build] [conf-autoconf: which autoconf] [conf-r: R CMD] [dolog: dune build]
-> retrieved line_oriented.1.3.0 (cached)
Processing 18/39: [camlp-streams: dune build] [conf-autoconf: which autoconf] [conf-r: R CMD] [dolog: dune build]
- /usr/bin/autoconf
-> compiled conf-autoconf.0.1
Processing 18/39: [camlp-streams: dune build] [conf-r: R CMD] [dolog: dune build]
-> installed conf-autoconf.0.1
Processing 19/39: [camlp-streams: dune build] [conf-r: R CMD] [dolog: dune build]
Processing 20/39: [camlp-streams: dune build] [conf-r: R CMD] [cpu: autoconf] [dolog: dune build]
-> retrieved minicli.5.0.2 (cached)
Processing 21/39: [camlp-streams: dune build] [conf-r: R CMD] [cpu: autoconf] [dolog: dune build]
Processing 22/39: [camlp-streams: dune build] [conf-r: R CMD] [cpu: autoconf] [dolog: dune build] [minicli: dune build]
-> retrieved num.1.5 (cached)
Processing 23/39: [camlp-streams: dune build] [conf-r: R CMD] [cpu: autoconf] [dolog: dune build] [minicli: dune build] [num: make opam-modern]
-> retrieved orrandomForest.3.0.0 (cached)
-> retrieved parany.14.0.1 (cached)
-> compiled conf-r.1.0.0
Processing 23/39: [camlp-streams: dune build] [cpu: autoconf] [dolog: dune build] [minicli: dune build] [num: make opam-modern]
-> installed conf-r.1.0.0
Processing 24/39: [camlp-streams: dune build] [cpu: autoconf] [dolog: dune build] [minicli: dune build] [num: make opam-modern]
- configure.ac:8: warning: The macro `AC_HEADER_STDC' is obsolete.
- configure.ac:8: You should run autoupdate.
- ./lib/autoconf/headers.m4:704: AC_HEADER_STDC is expanded from...
- configure.ac:8: the top level
Processing 24/39: [camlp-streams: dune build] [cpu: autoheader] [dolog: dune build] [minicli: dune build] [num: make opam-modern]
-> compiled dolog.6.0.0
Processing 24/39: [camlp-streams: dune build] [cpu: autoheader] [minicli: dune build] [num: make opam-modern]
-> installed dolog.6.0.0
Processing 25/39: [camlp-streams: dune build] [cpu: autoheader] [minicli: dune build] [num: make opam-modern]
-> compiled minicli.5.0.2
Processing 25/39: [camlp-streams: dune build] [cpu: autoheader] [num: make opam-modern]
-> installed minicli.5.0.2
Processing 26/39: [camlp-streams: dune build] [cpu: autoheader] [num: make opam-modern]
-> compiled camlp-streams.5.0.1
Processing 26/39: [cpu: autoheader] [num: make opam-modern]
-> installed camlp-streams.5.0.1
Processing 27/39: [cpu: autoheader] [num: make opam-modern]
Processing 27/39: [cpu: ./configure] [num: make opam-modern]
- checking for ocamlc... ocamlc
- OCaml version is 5.1.1
- OCaml library path is /home/opam/.opam/5.1/lib/ocaml
- checking for ocamlopt... ocamlopt
- checking for ocamlc.opt... ocamlc.opt
- checking for ocamlopt.opt... ocamlopt.opt
- checking for dynlink.cmxa... no
- checking for ocaml... ocaml
- checking for ocamldep... ocamldep
- checking for ocamlmktop... ocamlmktop
- checking for ocamlmklib... ocamlmklib
- checking for ocamldoc... ocamldoc
- checking for ocamlbuild... no
- checking for gcc... gcc
- checking whether the C compiler works... yes
- checking for C compiler default output file name... a.out
- checking for suffix of executables...
- checking whether we are cross compiling... no
- checking for suffix of object files... o
- checking whether the compiler supports GNU C... yes
- checking whether gcc accepts -g... yes
- checking for gcc option to enable C11 features... none needed
- checking for stdio.h... yes
- checking for stdlib.h... yes
- checking for string.h... yes
- checking for inttypes.h... yes
- checking for stdint.h... yes
- checking for strings.h... yes
- checking for sys/stat.h... yes
- checking for sys/types.h... yes
- checking for unistd.h... yes
- checking for grep that handles long lines and -e... /usr/bin/grep
- checking for egrep... /usr/bin/grep -E
- checking for sched.h... yes
- checking for gcc options needed to detect all undeclared functions... none needed
- checking whether sched_setaffinity is declared... yes
- checking for mach/thread_policy.h... no
- checking whether thread_policy_set is declared... no
- configure: creating ./config.status
- config.status: creating src/config.h
Processing 27/39: [cpu: dune build] [num: make opam-modern]
- /usr/bin/make -C src all
- make[1]: Entering directory '/home/opam/.opam/5.1/.opam-switch/build/num.1.5/src'
- ocamlc -ccopt -DBNG_ARCH_amd64 -c bng.c
- ocamlc -ccopt -DBNG_ARCH_amd64 -c nat_stubs.c
- ocamlmklib -oc nums bng.o nat_stubs.o
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c int_misc.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c int_misc.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c nat.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c nat.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c big_int.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c big_int.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_flags.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_flags.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c ratio.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c ratio.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_status.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_status.ml
- ocamlmklib -o nums -oc nums -linkall int_misc.cmo nat.cmo big_int.cmo arith_flags.cmo ratio.cmo num.cmo arith_status.cmo
- cp ../toplevel/num_top_printers.mli ../toplevel/num_top.mli ../toplevel/num_top_printers.ml ../toplevel/num_top.ml .
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num_top_printers.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num_top_printers.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num_top.mli
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num_top.ml
- ocamlc -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -a -o num_top.cma num_top_printers.cmo num_top.cmo
- echo 'version = "1.6~dev"' > META.top
- cat META.num-top.in >> META.top
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c int_misc.ml
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c nat.ml
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c big_int.ml
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_flags.ml
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c ratio.ml
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c num.ml
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -c arith_status.ml
- ocamlmklib -o nums -oc nums -linkall int_misc.cmx nat.cmx big_int.cmx arith_flags.cmx ratio.cmx num.cmx arith_status.cmx
- ocamlopt -w +a-4-9-41-42-44-45-48 -bin-annot -g -safe-string -strict-sequence -strict-formats -I +compiler-libs -I . -shared -o nums.cmxs nums.cmxa
- make[1]: Leaving directory '/home/opam/.opam/5.1/.opam-switch/build/num.1.5/src'
- cp src/num-modern.install num.install
-> compiled num.1.5
Processing 27/39: [cpu: dune build]
-> installed num.1.5
Processing 28/39: [cpu: dune build]
Processing 29/39: [batteries: dune build] [cpu: dune build]
-> compiled cpu.2.0.0
Processing 29/39: [batteries: dune build]
-> installed cpu.2.0.0
Processing 30/39: [batteries: dune build]
Processing 31/39: [batteries: dune build] [parany: dune build]
-> compiled parany.14.0.1
Processing 31/39: [batteries: dune build]
-> installed parany.14.0.1
Processing 32/39: [batteries: dune build]
+ /home/opam/.opam/5.1/bin/dune "build" "-p" "batteries" "-j" "255" "@install" (CWD=/home/opam/.opam/5.1/.opam-switch/build/batteries.3.7.2)
-> compiled batteries.3.7.2
-> installed batteries.3.7.2
Processing 34/39: [cpm: dune build]
Processing 35/39: [cpm: dune build] [line_oriented: dune build]
-> compiled line_oriented.1.3.0
Processing 35/39: [cpm: dune build]
-> installed line_oriented.1.3.0
Processing 36/39: [cpm: dune build]
+ /home/opam/.opam/5.1/bin/dune "build" "-p" "cpm" "-j" "255" (CWD=/home/opam/.opam/5.1/.opam-switch/build/cpm.12.2.0)
-> compiled cpm.12.2.0
-> installed cpm.12.2.0
Processing 38/39: [orrandomForest: dune build]
+ /home/opam/.opam/5.1/bin/dune "build" "-p" "orrandomForest" "-j" "255" (CWD=/home/opam/.opam/5.1/.opam-switch/build/orrandomForest.3.0.0)
-> compiled orrandomForest.3.0.0
Processing 39/39: [orrandomForest: R CMD]
+ /usr/bin/R "CMD" "BATCH" "install_randomForest.r" (CWD=/home/opam/.opam/5.1/.opam-switch/build/orrandomForest.3.0.0)
[ERROR] The installation of orrandomForest failed at "R CMD BATCH install_randomForest.r".
#=== ERROR while installing orrandomForest.3.0.0 ==============================#
# context 2.1.5 | linux/x86_64 | ocaml-base-compiler.5.1.1 | file:///src
# path ~/.opam/5.1/.opam-switch/build/orrandomForest.3.0.0
# command /usr/bin/R CMD BATCH install_randomForest.r
# exit-code 1
# env-file ~/.opam/log/orrandomForest-113-b789db.env
# output-file ~/.opam/log/orrandomForest-113-b789db.out
<><> Error report <><><><><><><><><><><><><><><><><><><><><><><><><><><><><><><>
+- The following actions failed
| - install orrandomForest 3.0.0
+-
+- The following changes have been performed
| - install batteries 3.7.2
| - install camlp-streams 5.0.1
| - install conf-autoconf 0.1
| - install conf-r 1.0.0
| - install conf-which 1
| - install cpm 12.2.0
| - install cpu 2.0.0
| - install dolog 6.0.0
| - install line_oriented 1.3.0
| - install minicli 5.0.2
| - install num 1.5
| - install parany 14.0.1
+-
<><> orrandomForest.3.0.0 troubleshooting <><><><><><><><><><><><><><><><><><><>
=> Please interact with R to install needed things in user-space:
R
install.packages('Marix', repos='http://cran.r-project.org')
install.packages('randomForest', repos='http://cran.r-project.org')
# Run eval $(opam env) to update the current shell environment
The former state can be restored with:
/usr/bin/opam switch import "/home/opam/.opam/5.1/.opam-switch/backup/state-20240129154341.export"
'opam --cli=2.1 install orrandomForest.3.0.0 parany.14.0.1 ocamlfind.1.9.6 num.1.5 minicli.5.0.2 line_oriented.1.3.0 dune.3.13.0 dolog.6.0.0 cpu.2.0.0 cpm.12.2.0 conf-which.1 conf-r.1.0.0 conf-autoconf.0.1 camlp-streams.5.0.1 batteries.3.7.2 --verbose --yes --confirm-level=unsafe-yes' failed.
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