package bio_io

You can search for identifiers within the package.

in-package search v0.2.0

bio_io
- Bio_io
  - Btab
    
    In_channel
    
    Record
    
    Parsed
    
    Fields
    
    Direct
  - Btab_queries
    
    In_channel
    
    T
    
    Record
  - Cigar
  - Fasta
    
    In_channel
    
    Record
  - Fastq
    
    In_channel
    
    Record
  - Private
    
    In_channel
    
    Peekable_in_channel
  - Record_in_channel
    
    In_channel_input_record
    
    Make
    
    M
    
    S
  - Utils

Legend:
Library
Module
Module type
Parameter
Class
Class type

Alternate interface to Stdio.In_channel. The create and with_file functions don't have a binary option, so it is compatible with the Record_in_channel.Make functor.

include module type of Stdio.In_channel

type t = Stdlib.in_channel

val equal : t Base__Equal.equal

val stdin : t

val close : t -> Base.unit

val input : t -> buf:Base.bytes -> pos:Base.int -> len:Base.int -> Base.int

val really_input : 
  t ->
  buf:Base.bytes ->
  pos:Base.int ->
  len:Base.int ->
  Base.unit Base.option

val really_input_exn : 
  t ->
  buf:Base.bytes ->
  pos:Base.int ->
  len:Base.int ->
  Base.unit

val input_char : t -> Base.char Base.option

val input_byte : t -> Base.int Base.option

val input_binary_int : t -> Base.int Base.option

val unsafe_input_value : t -> 'a Base.option

val input_buffer : t -> Base.Buffer.t -> len:Base.int -> Base.unit Base.option

val input_all : t -> Base.string

val input_line : ?fix_win_eol:Base.bool -> t -> Base.string Base.option

val input_line_exn : ?fix_win_eol:Base.bool -> t -> Base.string

val fold_lines : 
  ?fix_win_eol:Base.bool ->
  t ->
  init:'a ->
  f:('a -> Base.string -> 'a) ->
  'a

val input_lines : ?fix_win_eol:Base.bool -> t -> Base.string Base.list

val iter_lines : 
  ?fix_win_eol:Base.bool ->
  t ->
  f:(Base.string -> Base.unit) ->
  Base.unit

val seek : t -> Base.int64 -> Base.unit

val pos : t -> Base.int64

val length : t -> Base.int64

val set_binary_mode : t -> Base.bool -> Base.unit

val read_lines : ?fix_win_eol:Base.bool -> Base.string -> Base.string Base.list

val read_all : Base.string -> Base.string

val create : Base.string -> t

val with_file : Base.string -> f:(t -> 'a) -> 'a