Low-level transforms.
val string_to_string_content :
?filename:string ->
unit ->
(string, ([ t | string content ], [> Error.parsing ]) Core_kernel.Result.t)
Tfxm.tCreate a parser that gets the "track", comment, and "browser" lines and puts the other lines in `content _.
val string_content_to_string :
?add_content_new_line:bool ->
unit ->
([ t | string content ], string) Tfxm.tCreate a printer for track files containing `content line lines.
val string_to_wig :
?filename:string ->
unit ->
(string,
([ t | Wig.item ], [> Error.parsing | Wig.Error.parsing ])
Core_kernel.Result.t)
Tfxm.tCreate a composite parser for UCSC WIG files.
Create a printer for track files containing WIG lines.
val string_to_gff :
?filename:string ->
tags:Gff.Tags.t ->
unit ->
(string,
([ t | Gff.item ], [> Error.parsing | Gff.Error.parsing ])
Core_kernel.Result.t)
Tfxm.tCreate a composite parser for UCSC GFF files.
val gff_to_string :
tags:Gff.Tags.t ->
unit ->
([ t | Gff.item ], string) Tfxm.tCreate a printer for track files containing GFF lines.
val string_to_bed :
?filename:string ->
?more_columns:Bed.parsing_spec ->
unit ->
(string,
([ t | Bed.item content ], [> Error.parsing | Bed.Error.parsing ])
Core_kernel.Result.t)
Tfxm.tCreate a composite parser for UCSC Bed(Graph) files.